RELEASE NOTES VERSION 3.2.1 Bug fix ------- Fixed a problem when retrieving gene identifiers (HGNC and UCSC identifiers both were returned, even though only one was selected) caused by addition of UCSC gene identifiers to Ensembl version 48. ============================================================================ RELEASE NOTES VERSION 3.2 New Data Content ---------------- - Port to Ensembl version 48. This version introduces following updates to the data content: * Re-release of Watson data * Additional updates to variation data * Patches to gene information * miRNA updates * New GeneOntology term projections * cDNA data updates New features ------------ - GeneCruiser web application "Find variations" and "Variations to genes" result pages contain links to external databases, helping users to easily further investigate their results. New Web Services ---------------- Added new Web Services that can be used to retrieve information about GeneCruiser properties, data source version information and available identifier types. Bug fix ------- Fixed a problem when retrieving variations using protein identifiers and post-transcriptional regulatory regions. ============================================================================ RELEASE NOTES VERSION 3.1 New Data Content ---------------- Updated to Ensembl version 47. - Assembly: NCBI 36, Oct 2005 - Genebuild: Ensembl, Sep 2007 - Variation data source versions: dbSNP (127), HGVbase (15), TSC (1). NOTE: Because of the new data build, HUGO identifiers have been replaced by HGNC identifiers. GeneCruiser Web Service users should change from using HUGO identifier to HGNC_GENE. See our Web Services Specification for more information. New features ------------ - Added information about GeneCruiser News mailing list and GeneCruiser GoogleGroup. - Added possibility to automatically join GeneCruiser News mailing list when registering. New Web Services ---------------- Added new Web Services to retrieve genes based on genomic locations. For details see "Genes byLocation" and "Genes byLocationOutputIdTypes" in our Web Services Specification. Fixed in this release --------------------- - Fixed a problem when trying to retrieve variations by location inside a variation. This only affected variations longer than two nucleotides. - Fixed a problem with validation of user inputs in the web application. - Various small improvements and performance enhancements. ============================================================================ RELEASE NOTES VERSION 3.0.1 Release Date 2007-10-31 Fixed in this release: Bug 1947 - Database key generation issue caused intermittent exceptions to be thrown by web application and web service. Messages included "Could not synchronize database state with session", "Could not execute JDBC batch update". ============================================================================